Since the Eighth Doctor's timeline wanders in and out of parallel timelines and paradoxes with an almost distressing frequency this is an attempt to keep his personal storyline straight, or at least as straight as can be managed.

Main storyline
~Doctor Who: The Movie
~Storm Warning (alternate synopsis)
~Sword of Orion (alternate synopsis)
~The Stones of Venice (alternate synopsis)
~Minuet in Hell (alternate synopsis)
~Invaders from Mars! (alternate synopsis)
~The Chimes of Midnight (alternate synopsis)
~Seasons of Fear (alternate synopsis)
~Embrace the Darkness (alternate synopsis)
~The Time of the Daleks (alternate synopsis)
~Neverland (alternate synopsis)
~Zagreus (alternate synopsis)
~Scherzo (alternate synopsis)
~The Creed of the Kromon (alternate synopsis)
~The Natural History of Fear (alternate synopsis)
~The Twilight Kingdom (alternate synopsis)
~Faith Stealer (alternate synopsis)
~The Last (alternate synopsis)
~Caerdroia (alternate synopsis)
~The Next Life (alternate synopsis)
~Terror Firma (alternate synopsis)
~Scaredy Cat (alternate synopsis)
~Other Lives (alternate synopsis)
~Time Works (alternate synopsis)
~Something Inside (alternate synopsis)
~Memory Lane (alternate synopsis)
~Absolution (alternate synopsis)
~The Girl Who Never Was (alternate synopsis)
~Blood of the Daleks (alternate synopses: part one; part two)
~Horror of Glam Rock (alternate synopsis)
~Immortal Beloved (alternate synopsis
~Phobos (alternate synopsis)
~No More Lies (alternate synopsis)
~Human Resources (alternate synopses: part one; part two)
~Dead London(alternate synopsis)
~Max Warp (alternate synopsis)
~Brave New Town (alternate synopsis)
~The Skull of Sobek (alternate synopsis)
~Grand Theft Cosmos (alternate synopsis)
~The Zygon Who Fell to Earth (alternate synopsis)
~Sisters of the Flame (alternate synopsis)
~The Vengeance of Morbius (alternate synopsis)
~Orbis (alternate synopsis)
~Hothouse (alternate synopsis)
~The Beast of Orlok (alternate synopsis)
~Wirrn Dawn (alternate synopsis)
~The Scapegoat (alternate synopsis)
~The Cannibalists (alternate synopsis)
~The Eight Truths (alternate synopsis)
~Worldwide Web (alternate synopsis)
~Death in Blackpool (alternate synopsis)
~An Earthly Child (alternate synopsis)
~Situation Vacant (alternate synopsis)
~Nevermore (alternate synopsis)
~The Book of Kells (alternate synopsis)
~Deimos (alternate synopsis)
~The Resurrection of Mars (alternate synopsis)
~Relative Dimensions (alternate synopsis)
~Prisoner of the Sun (alternate synopsis)
~Lucie Miller (alternate synopsis)
~To the Death (alternate synopsis)
~Dark Eyes
~~The Great War (alternate synopsis)
~~Fugitives (alternate synopsis)
~~Tangled Web (alternate synopsis)
~~X and the Daleks (alternate synopsis)
~Dark Eyes 2 {note: the events of "The Traitor" take place after the majority of the events of "Eyes of the Master"}
~~The Traitor (alternate synopsis)
~~The White Room (alternate synopsis)
~~Time's Horizon (alternate synopsis)
~~Eyes of the Master (alternate synopsis)




Wibbly-Wobbly Timey-Wimey Department
~The Genocide Machine (as Seven)
~The Apocalypse Element (as Six)
~The Mutant Phase (as Five)
~Living Legend (traveling with Charley)
~The Light at the End (traveling with Charley; has been through, but doesn't consciously recall thanks to events of the audio itself)
~The Four Doctors (no companion mentioned, aired in 2010)